Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
UVM | rs74007096 | chr15:29413655 | C/G | 7.26E-5 | 67 | 25.77 | 41.87 | 7.6 | KM Plot |
UVM | rs74384244 | chr20:30424265 | G/A | 0.000118 | 67 | 27.92 | 8.18 | 7.6 | KM Plot |
UVM | rs74688437 | chr20:30428154 | G/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs74974705 | chr20:30228413 | C/T | 6.36E-5 | 67 | 27.92 | 8.25 | 7.6 | KM Plot |
UVM | rs75159543 | chr15:40665228 | C/T | 5.12E-7 | 66 | 26.55 | 24.87 | 1.27 | KM Plot |
UVM | rs75548461 | chr20:30235761 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs75805013 | chr20:30423213 | A/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs76078014 | chr20:30415636 | T/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs7618399 | chr3:125649499 | G/C | 0.000104 | 65 | 25.32 | 33.23 | 7.6 | KM Plot |
UVM | rs76224755 | chr20:30235046 | C/A | 6.36E-5 | 67 | 27.92 | 8.25 | 7.6 | KM Plot |
UVM | rs76277863 | chr15:40649863 | A/G | 4.04E-7 | 67 | 26.6 | 24.87 | 1.27 | KM Plot |
UVM | rs7629977 | chr3:125649573 | T/G | 0.000104 | 65 | 25.32 | 33.23 | 7.6 | KM Plot |
UVM | rs76353241 | chr20:30235701 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs76562100 | chr20:30255962 | C/A | 0.000118 | 67 | 27.92 | 8.18 | 7.6 | KM Plot |
UVM | rs76700379 | chr20:30234910 | C/G | 6.36E-5 | 67 | 27.92 | 8.25 | 7.6 | KM Plot |